Fast and Flexible Omics Data Analysis for Proteomics Research in Oncology

Fast and Flexible Omics Data Analysis for Proteomics Research in Oncology

Client Profile

The Section for Translational Surgical Oncology and Biomaterial Banks at the University of Lübeck conducts research focusing on the role of genomic instability in the development and progression of solid tumors. Investigations also center on identifying and characterizing proteins, autoantibodies, CTCs (circulating tumor cells), platelets, and other blood or body fluids.

The primary focus of the group is oncological research, leveraging protein biomarkers for diagnosis, prognosis, therapy, and aftercare. To this end, the research group of Prof. Gemoll and colleagues have established complex methods such as ESI- & MALDI-MS, 2-DIGE, MALDI imaging, and quantitative Western blotting within the clinical setting. These methods have yielded valuable results through close collaboration with clinics and institutes.

Challenges

Complex protein analysis of large data sets with up to 10,000 proteins in up to 150 samples

Partners in research collaborations find it challenging to deal with the complexity of data provided

The time required for analyses can be long

Results with Omics Playground

Significant time savings in analysis

Reduction of data complexity

Easier sharing of data sets

Fast and Flexible Omics Data Analysis for Proteomics Research in Oncology
« To be honest, we don't know of any alternative to Omics Playground. Except of programming codes ourselves! In the past, we used to collect small tools from different places. Omics Playground, on the other hand, has the advantage that everything is bundled in one place and works super fast. I haven't come across this anywhere else. »
Timo Gemoll
Professor of Oncological Proteome Research