How to Find Biomarkers: Definition, Examples, and Computational Methods for Detection Published on April 29th, 2024⏱ 9 min read Introduction Novel biomarker discovery is crucial to many areas, including clinical diagnostics …
Achieving End-to-End Omics Data Analysis and Facilitating Interactive Results Sharing in Sequencing Units Published on March 28th, 2024by Murat Akhmedov ⏱ 12 min read Introduction I recently had the opportunity to …
The Tricky Problem of ‘Batch Effects’ in Biological Data What are batch effects and how do you batch correct your data. Published on March 8th, 2024Written by Antonino Zito, PhD⏱ 7 …
Fast, Flexible and Creative Omics Data Analysis for Cancer Drug Discovery ✅ Rapid data retrieval and reanalysis. ✅ Efficient Biomarker Identification ✅ Simplified insight extraction Download the case study Client …
Beyond Basic Bioinformatics Analysis: How to Extract the Most Information from Your Transcriptomics Data 7 bioinformatics analysis approaches for your transcriptome data to get the most out of your experiments. …
BigOmics and Almaden Genomics Collaborate to Provide End-to-End Omics Data Analysis Published on February 22nd, 2024⏱ 3 min read LUGANO, Switzerland – February 22nd, 2024 – BigOmics Analytics has announced its …
Unleashing the Power of httpOnly Cookies in R Shiny Applications A Comprehensive Guide Published on February 20th, 2024Written by Xavier Escribà Montagut, Software engineer ⏱ 13 min read What’s In Store? …
Three Shades of Bioinformatics Analysis: Full Service, Self-Service, Governed Self-Service Analytics The Role of Omics Data Analysis Solutions in Bioinformatics Analysis Published on February 6th, 2024 by Murat Akhmedov, CEO ⏱ 9 …
How to Upload Your RNA-Seq and Proteomics Data to Omics Playground Step-by-step tutorial Published on February 5th, 2024⏱ 9 min read Introduction In this step-by-step guide, we will walk you through …
How to Perform Differential Gene Expression Analysis Steps in analyses of gene expression data and popular differential gene expression analysis methods Published on January 30th, 2024 by Antonino Zito, PhD ⏱ 6 …
Omics Data Analysis Software as an Educational and Training Tool Omics Playground: Your Essential Solution for Data Analysis Training and Publication Reviewing Published on January 16th, 2024⏱ 5 min read Introduction …
What causes missing values in proteomics (and metabolomics) and how to assess several imputation methods.
Omics Playground V3:A Fresh Look and Exciting New Features Published on December 14th, 2023⏱ 9 min read Introduction We’re excited to announce the release of Version 3 of Omics Playground. As …
Three Main Challenges in Omics Data Analysis and the Future of Bioinformatics – Interview with Ming Tommy Tang Published on December 12th, 2023⏱ 9 min read Introduction There are several challenging …
Common Bioinformatics Data Analysis Mistakes Checklist of errors to avoid and recommendations for successful bioinformatic data analysis. Published on November 20th, 2023⏱ 9 min read Introduction In this blog article, we …
The Landscape of Bioinformatics Tools and the Importance of Interoperability for “End-to-end” Omics Data Analysis Published on November 20th, 2023 by Murat Akhmedov, CEO⏱ 9 min read Introduction Omics experiments involve …
Exploring Omics Playground: A Computational Biologist’s Evaluation Published on Nov 8, 2023Written by Murat Akhmedov, CEO ⏱ 8 min read I recently had the opportunity to interview Jonathan Landry, a computational …
The Evolution of Biodata Analysis and Visualization From Script to Reports to Interactive Dashboards Published on October 31st, 2023 Written by Murat Akhmedov, CEO⏱ 9 min read Introduction The enormous amounts …
Common Mistakes in Omics Experimental Design for Biologists Published on October 18th, 2023Written by Axel Martinelli⏱ 5 min read Introduction Scientists frequently make mistakes in experimental design. The good news …
Top RNA Seq Service Providers for Your Experiment Top CROs, their role in RNA-Seq data generation and how to choose the right one for your RNA-Seq experiment. Published on September …
Enabling Omics Data Analysis at Scale Bioinformatics Support to Understand Human Immunology Download the case study Goal The Institute for Research in Biomedicine (IRB) in Bellinzona stands out as an …
Intuitive and Easy-To-Use Omics Data Analysis Using Human Brain Organoids for Drug Screening Download the case study Goal A leading interdisciplinary research institute in Boston with an expert team of …
A Short Guide to Enrichment Analysis Published on Aug 21, 2023by Ivo Kwee Enrichment Analysis (EA), or also called Gene Set Analysis (GSA), is a computational method used to analyze …
Build or Buy: Big Data Challenges in Omics Data Analysis Comparing In-House Analysis Solutions vs. Buying External Solutions Published on August 7th, 2023by Murat Akhmedov ⏱ 9 min read Introduction Research …
DNAnexus and BigOmics Analytics Join Forces to Improve Proteomics and Transcriptomics Data Visualization and Interpretation Published on August 2nd, 2023by BigOmics Complete collaborative environment with intuitive interface addresses common analysis …
Flexible, Trusted and User-Friendly Omics Data Analysis Revolutionizing Novel Cancer Drug Discovery with Omics Data Analysis Download the case study Goal Valerio Therapeutics is a clinical-stage biotechnology company developing novel …
Advances in Parkinson’s Disease Research and Michael J. Fox’s Story Published on July 4th, 2023by Axel Martinelli, PhD ⏱ 7 min read Neurodegenerative Diseases – Can They Be Eradicated in Our …
Insights into Neurodegenerative Diseases using Transcriptomics Datasets A re-analysis of the similarities and differences between Alzheimer’s disease and Parkinson’s disease. Published on June 27th, 2023By Axel Martinelli, PhD What are …
The Application of RNA-Seq and Proteomics in Cancer Research Published on June 20th, 2023by Axel Martinelli, PhD ⏱ 5 min read Introduction Pharmaceutical companies are under intense pressure to succeed in …
Revolutionary Cancer Research Breakthroughs The impact of RNA-seq and Proteomics technologies in advancing cancer treatments, improving therapies and driving cancer research breakthroughs. Published on June 6th, 2023by Axel Martinelli, PhD …
RNA-seq transcriptome analysis of the anti-inflammatory effect of artesunate on cerebral malaria Re-Analysis Published on April 25th, 2023by Axel Martinelli, PhD ⏱ 11 min read Introduction to the Cerebral Malaria …
9 factors you should consider when choosing RNA-seq analysis and visualization software Published on April 20th, 2023 by BigOmics⏱ 11 min read Commercial RNA-seq data analysis software allows researchers, biotechnology, …
In this article, we give an overview of why RNA-seq normalization is essential, and we break down different RNA-seq normalization methods to help you master your next RNA-seq analysis.
The Ultimate Guide to Public RNA-Seq and single-cell RNA-Seq Databases: a Comparative Review Last updated on January 9th, 2024⏱ 13 min read Introduction The wealth of publicly available RNA-sequencing (RNA-seq) and …
How to prepare your RNA-Seq and proteomics data for Omics Playground Published on February 22nd, 2023 by BigOmicsLast updated on February 2nd, 2024⏱ 9 min read Omics Playground is a …
How to convert FASTQ files into read count tables using Galaxy Published on August 2nd, 2022 by Axel Martinelli This short guide is meant for biologists with little or no …
Omics data is becoming ubiquitous both in biological and, increasingly, medical research. Rapid developments in reagents, sequencing technologies and analysis are constantly pushing down costs while increasing the amount of …
Browsing through the most recent proteomics dataset on the public PRIDE database, I came across this study (PXD033148) from Wang and colleagues at Xiangya Hospital of Central South University in …
Lugano, March 17, 2022 – BigOmics Analytics, a Swiss biodata analytics startup, announces raising additional funding from Eppendorf, a leading life science company that develops and sells instruments, consumables and …
The Role of Osteopontin on Prostatic Fibrosis and Inflammation Published on January 19th, 2022 by Axel Martinelli For this post, I will re-analyse the transcriptomic data from a recently published …
Remix Therapeutics is a Boston-based biotechnology company developing novel small molecule therapies for reprogramming RNA processing and treating disease in entirely new ways. As protein targeting therapies reach the limits …
Bellinzona, Switzerland, December 10, 2021 – BigOmics Analytics SA (“BigOmics”), a Swiss biodata analytics startup, announced today that it raised a total of $1.85 million in financing. This funding will …
We are excited to announce that we are exhibitors at the BioData & Genomics Live World Congress in Basel. BioData World covers big data in pharmaceutical development and healthcare. Genomics …
The original article by Stilling et al (2018), described the association between gut microbiome composition and social behaviour in mice. They compared the social interaction of germ-free mice (GF, devoid …
The analysis of omics data involves the collaboration of biologists and bioinformaticians. They need each other to generate the data and analyse it. Biologists have a deep understanding of the …
We are excited to announce that BigOmics will be sponsoring the BC2 conference that will take place at the Congress Center Basel and online from 13 – 15 September 2021. …
The Genotype-Tissue Expression program (GTEx) is an extensive collection of gene expression profiles from 54 different tissue sites across more than 1000 individuals. This data can provide various insights on …
IL-17A as a possible therapeutic target for Osteoarthritis Published on July 8th, 2021by Axel Martinelli For this brief article, I have decided to re-analyse the RNA-seq data from a recently …
Glucocorticoid Resistance in Multiple Myeloma: a Dataset Re-analysis Published on April 28th, 2021 For this post, I decided to re-analyse a dataset from a recent article by Logie et al …
In-house or out-house: Is it time to outsource bioinformatics? Published on April 14th, 2021⏱ 4 min read This post is based on two recent blog posts on the state of …
