How to Analyze Proteomics Data
How to Analyze Proteomics Data Using Omics Playground Steps involved in the analysis, statistical methods applied and suggested analyses to visually interpret your proteomics data. Published on December 23rd, 2024⏱ …
Key Challenges in Multi-omics Data Integration
Key Challenges in Multi-Omics Data Integration Published on October 21, 2025Written by Antonino Zito 10 min read Introduction Multi-omics data integration aims to harmonize multiple layers of biological data, such …
Guide to Public RNA-Seq and single-cell RNA-Seq Databases: a Comparative Review
The Ultimate Guide to Public RNA-Seq and single-cell RNA-Seq Databases: a Comparative Review Last updated on September 2025 13 min read Introduction The wealth of publicly available RNA-sequencing (RNA-seq) and single-cell …
Introduction to WGCNA: Applications in Gene Correlation Network Analysis
A Complete Guide to WGCNA: Applications in Gene Correlation Network Analysis Published on October 2, 2025Last updated on February 23, 2026 by Antonino Zito 10 min read Introduction Weighted gene co-expression …
Using Omics Playground to Analyze Olink Proteomic Data
Using Omics Playground to Analyze Olink Proteomic Data Published on August 6th, 2025 3 min read Introduction Olink Target proteomics data are protein measurements obtained using Olink’s Proximity Extension Assay …
Efficient Single-Sample Gene Set Enrichment Scoring Methods for Large-Scale Datasets
Efficient Single-Sample Gene Set Enrichment Scoring Methods for Large-Scale Datasets Published on July 23, 2025Written by Antonino Zito⏱ 4 min read The prominent problem of scalable single sample gene set …
Combining Multi-Omics Factorization Methods for Robust Biomarker Identification
Combining Multi-Omics Factorization Methods for Robust Biomarker Identification Written by Ivo Kwee⏱ 5 min read Introduction Multi-omics biomarker identification is crucial for advancing biomedical research and personalized medicine. Computational genomic …
Preprocessing of MS-based Proteomics Data: Overview and Software Options
Preprocessing of MS-based Proteomics Data: Overview and Software Options Published on April 23nd, 2025Written by Shujia Dai, Ph.D⏱ 12 min read Introduction to Proteomics Data Preprocessing Mass spectrometry (MS)-based proteomics …
How to Identify Biomarkers: Definition, Examples, and Algorithms for Detection
How to Identify Biomarkers:Definition, Examples, and Algorithms for Detection How to Identify Biomarkers: Definition, Examples, and Algorithms for Detection ⏱ 9 min readby Axel Martinelli Introduction Novel biomarker discovery is crucial …
Why and How to Normalize RNA-Seq Data
In this article, we give an overview of why RNA-seq normalization is essential, and we break down different RNA-seq normalization methods to help you master your next RNA-seq analysis.